BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB002A05LP1|AL424883
(1039 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig964 1738 0.0
>3x_Contig964
Length = 3868
Score = 1738 bits (874), Expect = 0.0
Identities = 972/992 (97%), Gaps = 11/992 (1%)
Strand = Plus / Minus
Query: 1 gatcaaaataaatttggaaaagacattttattgttttccatgtagtagcatatctcttca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1585 gatcaaaataaatttggaaaagacattttattgttttccatgtagtagcatatctcttca 1526
Query: 61 gatgattcamaggttttactggcatctgatttagtaccaaacactaggggttataaattt 120
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1525 gatgattcacaggttttactggcatctgatttagtaccaaacactaggggttataaatct 1466
Query: 121 tataaattgttcacgttatcatataataaatatggatatactttaatttacaaaacattt 180
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 1465 cataaattgttcacgttatcatataatacatatggatatactttaatttacaaaacattt 1406
Query: 181 gtctatacatttattgaaggatctcttatcatccagtttcgttgtcgattctagctgtat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1405 gtctatacatttattgaaggatctcttatcatccagtttcgttgtcgattctagctgtat 1346
Query: 241 actttttcaacggctttttcaaamatgttcaaacctttctccaacaagttgtcttcaatg 300
||||||||||||||||||||||| |||||||| |||||||| ||||||||||||||| ||
Sbjct: 1345 actttttcaacggctttttcaaa-atgttcaa-cctttctc-aacaagttgtcttca-tg 1290
Query: 301 gtcaaagccggaacaaatctgactgttgtcttaccagcggtaataatcaaaagaccactg 360
||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1289 gtcaa-gccgga-caaatctgactgttgtcttaccagcggtaataatcaaaagaccactg 1232
Query: 361 tctctagcagcatcaacaatttttgctggtgcctcgtcaaaatcgcmacccatcattaaa 420
|||||||||||||||||||||||||||| ||||||||||||||||| ||| |||||||||
Sbjct: 1231 tctctagcagcatcaacaatttttgctg-tgcctcgtcaaaatcgcaaccaatcattaaa 1173
Query: 421 cccttccctctaatatctttgatatgctctgggaaacgctcttgtagctttctcaaacgg 480
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 1172 cccttccctctaatatctgtgatatgctctgggaaacgctcttgtagctttctcaaacgg 1113
Query: 481 ttagtgataatctcacccttcttattaacttcatccaagaatttttgttcggcaatgacg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1112 ttagtgataatctcacccttcttattaacttcatccaagaatttttgttcggcaatgacg 1053
Query: 541 ttaacaacatagttaccgacagccgaacccaatgggttaccaccataagtggtaccatga 600
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 1052 ttaacaacatagttaccgacagcagaacccaatgggttaccaccataagtggtaccatga 993
Query: 601 tcaccaacttttagaatatcgtttaccttgtcattggtcacagtagcagcgatagggaat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 992 tcaccaacttttagaatatcgtttaccttgtcattggtcacagtagcagcgatagggaat 933
Query: 661 ccattaccaagtgccttggctgtagtgaagatgtctggatgagcctcctttggcaagtat 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 932 ccattaccaagtgccttggctgtagtgaagatgtctggatgagcctcctttggcaagtat 873
Query: 721 gaatgtgcccataacttgcctgaacgacctagaccacattggatttcatcgtaaatgaca 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 872 gaatgtgcccataacttgcctgaacgacctagaccacattggatttcatcgtaaatgaca 813
Query: 781 ataatatcgtgatcctcacaaattttctttaatccaactaaagtgtccaatgggattggg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 812 ataatatcgtgatcctcacaaattttctttaatccaactaaagtgtccaatgggattggg 753
Query: 841 aacacaccaccttcaccttgaattggtt-cacaatcaacccagcagtcttttctttcaag 899
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 752 aacacaccaccttcaccttgaattggttccacaatcaacccagcagtcttttctttcaag 693
Query: 900 ctagaaacttgttgatccaatttggtcagctcatcgttaatattt-aaaattccactccg 958
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 692 ctagaaacttgttgatccaatttggtcagctcatcgttaatatttaaaaattccactccg 633
Query: 959 ggaatcaaag-amcaaatgg-tcacgatattt 988
|||||||||| | ||||||| |||||||||||
Sbjct: 632 ggaatcaaagaaccaaatggttcacgatattt 601
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8134
Number of Sequences: 1807
Number of extensions: 8134
Number of successful extensions: 47
Number of sequences better than 1.0e-20: 1
length of query: 1039
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1023
effective length of database: 10,329,639
effective search space: 10567220697
effective search space used: 10567220697
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)